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DVU_1138 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1138" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1138Uncharacterized protein; Identified by Glimmer2; putative (210 aa)    
Predicted Functional Partners:
DVU_1139
Bacteriophage DNA transposition B protein, putative; Identified by similarity to GP-974770 (245 aa)
              0.885
DVU_1136
Host-nuclease inhibitor protein Gam, putative; Identified by similarity to SP-P06023 (170 aa)
              0.876
DVU_1140
Bacteriophage transposase A protein, putative; Identified by similarity to SP-P07636 (717 aa)
              0.856
DVU_1137
Uncharacterized protein; Identified by Glimmer2; putative (62 aa)
              0.845
DVU_1135
Conserved domain protein; Identified by similarity to GP-14277814 (79 aa)
              0.806
hupB
DNA-binding protein HU, beta subunit; Identified by similarity to SP-P02346; match to protein family HMM PF00216; Belongs to the bacterial histone-like protein family (95 aa)
              0.788
DVU_1132
Uncharacterized protein; Identified by similarity to OMNI-NMB0985 (169 aa)
              0.585
DVU_1131
Uncharacterized protein; Identified by Glimmer2; putative (121 aa)
              0.583
DVU_1133
Uncharacterized protein; Identified by Glimmer2; putative (152 aa)
              0.570
DVU_1130
annotation not available (154 aa)
              0.570
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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