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DVU_1214 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1214" - Identified by match to protein family HMM PF02366 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1214Identified by match to protein family HMM PF02366 (667 aa)    
Predicted Functional Partners:
DVU_1563
Sensory box histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229 (1039 aa)
   
   
  0.772
DVU_1215
Identified by match to protein family HMM PF01569 (218 aa)
 
     
  0.768
DVU_3013
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (568 aa)
 
   
  0.752
DVU_2052
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (240 aa)
   
  0.744
ribD
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5’-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5’-phosphate; In the C-terminal section; belongs to the HTP reductase family (377 aa)
         
  0.703
DVU_1012
Hemolysin-type calcium-binding repeat protein; Identified by match to protein family HMM PF00092; match to protein family HMM PF00353; match to protein family HMM TIGR01612 (3038 aa)
     
 
  0.694
DVU_0622
Sensor histidine kinase/response regulator; Identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518 (832 aa)
   
   
  0.680
DVU_0449
Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (1513 aa)
   
   
  0.659
DVU_1537
Lipoprotein, putative; Identified by match to protein family HMM PF03938 (188 aa)
 
          0.638
DVU_2899
Uncharacterized protein; Identified by Glimmer2; putative (286 aa)
 
          0.636
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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