STRINGSTRING
DVU_1262 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1262" - Twitching motility protein PilT in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1262Twitching motility protein PilT; Identified by similarity to SP-P24559; match to protein family HMM PF00437; match to protein family HMM TIGR01420 (369 aa)    
Predicted Functional Partners:
pppA
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue (267 aa)
 
   
  0.949
DVU_1271
General secretion pathway protein F, putative; Identified by similarity to GP-4139238; match to protein family HMM PF00482 (408 aa)
 
   
  0.941
DVU_1261
Conserved domain protein; Identified by similarity to SP-P45754 (586 aa)
 
          0.877
DVU_1273
Bacterial type II/III secretion system protein; Identified by match to protein family HMM PF00263; match to protein family HMM PF03958 (524 aa)
 
   
  0.870
DVU_1272
General secretion pathway protein E, putative; Identified by similarity to SP-P37093; match to protein family HMM PF00437; match to protein family HMM PF05157 (573 aa)
 
   
0.632
DVU_0449
Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (1513 aa)
         
  0.538
DVU_3257
DNA internalization-related competence protein ComEC/Rec2; Identified by similarity to SP-P39695; match to protein family HMM TIGR00360 (974 aa)
         
  0.535
DVU_2738
Methyl-accepting chemotaxis protein; Identified by similarity to SP-P39214; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM TIGR00229 (801 aa)
   
   
  0.440
DVU_1869
Methyl-accepting chemotaxis protein; Identified by similarity to SP-P39216; match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM TIGR00229 (771 aa)
   
   
  0.440
DVU_0700
Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672; match to protein family HMM PF00785; match to protein family HMM TIGR00229 (818 aa)
   
   
  0.440
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (16%) [HD]