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DVU_1339 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1339" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1339annotation not available (276 aa)    
Predicted Functional Partners:
DVU_1338
Uncharacterized protein; Identified by similarity to OMNI-SO3257 (194 aa)
 
          0.853
DVU_3172
Uncharacterized protein; Identified by Glimmer2; putative (715 aa)
   
          0.641
DVU_2971
Glycosyl transferase, family 8; Identified by match to protein family HMM PF01501 (303 aa)
   
          0.586
DVU_1359
Uncharacterized protein; Identified by Glimmer2; putative (427 aa)
   
          0.550
DVU_1682
GAF domain protein; Identified by match to protein family HMM PF01590 (344 aa)
 
   
  0.515
DVU_1343
Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297 (335 aa)
              0.500
DVU_1342
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to SP-Q9XDA6; match to protein family HMM PF00005 (268 aa)
              0.500
DVU_1341
Cation ABC transporter, permease protein; Identified by similarity to GP-5019735; match to protein family HMM PF00950 (274 aa)
              0.500
DVU_1340
annotation not available (164 aa)
              0.500
DVU_3186
Uncharacterized protein; Identified by Glimmer2; putative (273 aa)
   
          0.473
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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