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DVU_1343 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1343" - Cation ABC transporter, periplasmc-binding protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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DVU_1343Cation ABC transporter, periplasmc-binding protein; Identified by match to protein family HMM PF01297 (335 aa)    
Predicted Functional Partners:
DVU_1341
Cation ABC transporter, permease protein; Identified by similarity to GP-5019735; match to protein family HMM PF00950 (274 aa)
 
  0.997
DVU_1342
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to SP-Q9XDA6; match to protein family HMM PF00005 (268 aa)
 
  0.995
DVU_0104
Cation ABC transporter, permease protein, putative; Identified by similarity to SP-P44661; match to protein family HMM PF00950 (278 aa)
   
  0.913
DVU_1340
annotation not available (164 aa)
         
  0.867
DVU_0102
Cation ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF01297 (330 aa)
         
    0.800
DVU_0079
ZIP zinc transporter family protein; Identified by similarity to SP-Q06916; match to protein family HMM PF02535 (267 aa)
       
  0.679
DVU_1339
annotation not available (276 aa)
              0.500
ispG
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate; Belongs to the IspG family (386 aa)
              0.472
proS
Proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction- proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as ’pretransfer’ editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated ’posttransfer’ editing and involves deacy [...] (574 aa)
              0.466
polA
DNA polymerase I; Identified by similarity to SP-P00582; match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593 (1015 aa)
              0.453
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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