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DVU_1481 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1481" - Nuclease domain protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
DVU_1481Nuclease domain protein; Identified by match to protein family HMM PF00565 (269 aa)    
Predicted Functional Partners:
DVU_1482
Uncharacterized protein; Identified by Glimmer2; putative (96 aa)
              0.845
DVU_1486
annotation not available (770 aa)
              0.761
DVU_1485
Uncharacterized protein; Identified by Glimmer2; putative (211 aa)
              0.761
DVU_1484
Uncharacterized protein; Identified by Glimmer2; putative (112 aa)
              0.761
DVU_1483
annotation not available (169 aa)
              0.761
hrpB
ATP-dependent helicase HrpB; Identified by similarity to SP-P37024; match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM TIGR01970 (847 aa)
     
 
  0.487
ldh
L-lactate dehydrogenase; Identified by similarity to SP-P00345; match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; Belongs to the LDH/MDH superfamily. LDH family (309 aa)
   
 
  0.434
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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