STRINGSTRING
DVU_1551 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1551" - HD domain protein in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_1551HD domain protein; Identified by match to protein family HMM PF01966 (468 aa)    
Predicted Functional Partners:
mop
Aldehyde oxidoreductase; Identified by similarity to SP-Q46509; match to protein family HMM PF00111; match to protein family HMM PF01315; match to protein family HMM PF01799; match to protein family HMM PF02738 (906 aa)
 
 
 
  0.982
DVU_1552
Uncharacterized protein; Identified by similarity to OMNI-NTL02SC5917; match to protein family HMM PF02625 (376 aa)
   
  0.945
DVU_1554
Radical SAM domain protein; Identified by match to protein family HMM PF04055 (543 aa)
          0.941
DVU_1550
Identified by match to protein family HMM PF00300 (218 aa)
          0.896
DVU_1555
Uncharacterized protein; Identified by Glimmer2; putative (150 aa)
 
          0.892
DVU_1557
Uncharacterized protein; Identified by Glimmer2; putative (71 aa)
 
          0.889
DVU_1558
Cysteine-rich domain/iron-sulfur cluster-binding domain protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754 (797 aa)
 
          0.880
DVU_1556
annotation not available (297 aa)
 
          0.779
DVU_1560
Molybdopterin biosynthesis protein, putative; Identified by match to protein family HMM PF00994 (339 aa)
     
  0.717
DVU_1553
annotation not available (449 aa)
 
          0.712
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
Server load: low (13%) [HD]