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DVU_1862 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1862" - GGDEF domain protein in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
DVU_1862GGDEF domain protein; Identified by match to protein family HMM PF00990; match to protein family HMM TIGR00254 (331 aa)    
Predicted Functional Partners:
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (371 aa)
   
        0.888
DVU_1863
Site-determining protein; Identified by similarity to OMNI-NTL03PA01455; Belongs to the ParA family (272 aa)
              0.886
cutE
Apolipoprotein N-acyltransferase; Transfers the fatty acyl group on membrane lipoproteins (502 aa)
   
        0.836
DVU_0457
EAL domain protein; Identified by match to protein family HMM PF00563 (416 aa)
 
  0.817
DVU_1859
Uncharacterized protein; Identified by Glimmer2; putative (41 aa)
              0.770
DVU_0449
Protein-glutamate methylesterase; Involved in the modulation of the chemotaxis system; catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR (1513 aa)
 
 
  0.768
DVU_2432
Sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 (1413 aa)
 
 
 
0.741
DVU_1864
DNA-binding protein HU, beta subunit, putative; Identified by similarity to SP-P08821; match to protein family HMM PF00216 (93 aa)
              0.722
DVU_3123
HD domain protein; Identified by match to protein family HMM PF01966 (231 aa)
 
 
  0.713
DVU_3064
Sensory box/GGDEF domain/EAL domain protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00785; match to protein family HMM PF00990; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254 (576 aa)
 
 
0.696
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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