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DVU_1893 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_1893" - Endopeptidase La in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
DVU_1893Endopeptidase La; Identified by match to protein family HMM PF05362 (806 aa)    
Predicted Functional Partners:
DVU_1892
Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535 (249 aa)
              0.583
DVU_1891
Uncharacterized protein; Identified by similarity to OMNI-NTL01NS1759; match to protein family HMM PF05143 (253 aa)
              0.583
DVU_2413
UPF0313 protein DVU_2413; Identified by match to protein family HMM PF04055 (680 aa)
   
        0.473
trmU
tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 (346 aa)
   
        0.426
rho
Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho’s RNA-dependent ATPase activity, and release of the mRNA from the DNA template (416 aa)
       
      0.410
DVU_0864
Glycoprotease family protein, putative; Identified by match to protein family HMM PF00814 (261 aa)
   
        0.405
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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