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hynB-1 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"hynB-1" - Periplasmic [NiFe] hydrogenase small subunit 1 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
hynB-1Periplasmic [NiFe] hydrogenase small subunit 1; Identified by similarity to SP-P21853; match to protein family HMM PF01058; match to protein family HMM TIGR00391; match to protein family HMM TIGR01409; Belongs to the [NiFe]/[NiFeSe] hydrogenase small subunit family (317 aa)    
Predicted Functional Partners:
hynA-1
Periplasmic [NiFe] hydrogenase, large subunit, isozyme 1; Identified by similarity to SP-P21852; match to protein family HMM PF00374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family (566 aa)
 
 
  0.997
hynA-2
Periplasmic [NiFe] hydrogenase, large subunit, isozyme 2; Identified by similarity to SP-P21852; match to protein family HMM PF00374; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family (549 aa)
 
 
  0.975
hysA
Periplasmic [NiFeSe] hydrogenase, large subunit, selenocysteine-containing; Selenoprotein; identified by match to protein family HMM PF00374 (510 aa)
 
 
  0.947
hupD
Hydrogenase expression/formation protein HupD; Identified by similarity to SP-P31909; match to protein family HMM PF01750; match to protein family HMM TIGR00072; match to protein family HMM TIGR00140 (165 aa)
 
 
  0.896
DVU_1919
Hydrogenase expression/formation protein, putative; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072 (156 aa)
 
 
  0.847
poR
Pyruvate synthase; Identified by similarity to GP-1770208; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855 (1215 aa)
   
   
  0.818
hypE
Hydrogenase expression/formation protein HypE; Identified by similarity to SP-P42034; match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR02124 (341 aa)
   
  0.668
hypB
Hydrogenase accessory protein HypB; Identified by similarity to SP-P24190; match to protein family HMM PF01495; match to protein family HMM TIGR00073 (224 aa)
 
 
  0.642
hypC
Hydrogenase assembly chaperone hypC/hupF; Identified by similarity to GP-15430693; match to protein family HMM PF01455; match to protein family HMM TIGR00074 (83 aa)
 
   
  0.638
DVU_1920
Uncharacterized protein; Identified by Glimmer2; putative (41 aa)
              0.612
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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