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DVU_2021 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2021" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2021Uncharacterized protein; Identified by Glimmer2; putative (155 aa)    
Predicted Functional Partners:
DVU_2025
Uncharacterized protein; Identified by similarity to GP-19882263; match to protein family HMM TIGR01612 (1183 aa)
              0.845
DVU_2024
Uncharacterized protein; Identified by similarity to OMNI-NMB2085 (354 aa)
              0.845
DVU_2023
Uncharacterized protein; Identified by Glimmer2; putative (179 aa)
              0.845
DVU_2022
Uncharacterized protein; Identified by similarity to GP-28629295 (1158 aa)
              0.845
DVU_2020
Uncharacterized protein; Identified by similarity to GP-20095133 (832 aa)
              0.845
DVU_2026
Uncharacterized protein; Identified by similarity to GP-19916320 (196 aa)
              0.837
DVU_2019
Uncharacterized protein; Identified by similarity to OMNI-NTL02MA2298 (689 aa)
              0.821
DVU_2491
ABC transporter, ATP-binding protein; Identified by similarity to SP-P31060; match to protein family HMM PF00005 (632 aa)
   
 
  0.661
DVU_0648
Iron compound ABC transporter, ATP-binding protein; Identified by similarity to SP-P07821; match to protein family HMM PF00005 (271 aa)
   
 
  0.648
DVU_0103
Cation ABC transporter, ATP-binding protein, putative; Identified by similarity to OMNI-NTL02SC0434; match to protein family HMM PF00005 (313 aa)
   
 
  0.648
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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