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DVU_2251 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2251" - Identified by match to protein family HMM PF01381 in Desulfovibrio vulgaris Hildenborough
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2251Identified by match to protein family HMM PF01381 (186 aa)    
Predicted Functional Partners:
DVU_2250
Identified by match to protein family HMM PF00501 (551 aa)
 
      0.993
DVU_3065
Identified by match to protein family HMM PF00501 (550 aa)
          0.601
DVU_3350
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037 (77 aa)
   
          0.506
dnaA-2
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (491 aa)
              0.458
DVU_3066
Identified by match to protein family HMM PF01381 (189 aa)
 
       
0.452
ptB
Phosphotransbutyrylase; Identified by similarity to GP-457633; match to protein family HMM PF01515 (343 aa)
 
            0.428
DVU_3028
Iron-sulfur cluster-binding protein; Identified by match to protein family HMM PF00037; match to protein family HMM PF02754 (422 aa)
       
      0.410
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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