STRINGSTRING
DVU_2611 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2611" - annotation not available in Desulfovibrio vulgaris Hildenborough
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2611annotation not available (519 aa)    
Predicted Functional Partners:
DVU_2282
Uncharacterized protein; Identified by Glimmer2; putative (516 aa)
   
          0.757
DVU_2604
Uncharacterized protein; Identified by similarity to GP-13186164 (569 aa)
 
          0.685
DVU_1980
Uncharacterized protein; Identified by Glimmer2; putative (130 aa)
   
          0.642
DVU_2610
Uncharacterized protein; Identified by Glimmer2; putative (225 aa)
              0.635
DVU_1721
Uncharacterized protein; Identified by Glimmer2; putative (550 aa)
 
          0.623
DVU_1942
Identified by match to protein family HMM PF02645; match to protein family HMM PF02734; match to protein family HMM TIGR00762 (637 aa)
   
          0.617
DVU_0186
Uncharacterized protein; Identified by similarity to OMNI-AF2126; match to protein family HMM PF02596 (259 aa)
   
          0.611
DVU_2516
CBS domain protein; Identified by match to protein family HMM PF00571 (161 aa)
   
          0.608
DVU_2598
Uncharacterized protein; Identified by Glimmer2; putative (184 aa)
 
          0.607
DVU_3196
Twin-arginine translocation pathway signal sequence domain protein; Identified by match to protein family HMM TIGR01409 (383 aa)
   
          0.607
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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