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DVU_2614 protein (Desulfovibrio vulgaris Hildenborough) - STRING interaction network
"DVU_2614" - Uncharacterized protein in Desulfovibrio vulgaris Hildenborough
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVU_2614Uncharacterized protein; Identified by Glimmer2; putative (205 aa)    
Predicted Functional Partners:
DVU_2613
Uncharacterized protein; Identified by Glimmer2; putative (188 aa)
 
        0.906
DVU_2612
Uncharacterized protein; Identified by similarity to OMNI-NTL03PA02779 (129 aa)
 
          0.896
DVU_1523
Uncharacterized protein; Identified by Glimmer2; putative (342 aa)
   
          0.438
DVU_2896
TPR domain protein; Identified by match to protein family HMM PF00515 (1076 aa)
 
   
  0.415
DVU_0276
Uncharacterized protein; Identified by similarity to OMNI-NTL02ST1965; match to protein family HMM PF03625 (132 aa)
     
        0.408
Your Current Organism:
Desulfovibrio vulgaris Hildenborough
NCBI taxonomy Id: 882
Other names: D. vulgaris str. Hildenborough, Desulfovibrio vulgaris (STRAIN HILDENBOROUGH), Desulfovibrio vulgaris ATCC 29579, Desulfovibrio vulgaris Hildenborough, Desulfovibrio vulgaris str. Hildenborough, Desulfovibrio vulgaris subsp. vulgaris (strain Hildenborough), Desulfovibrio vulgaris subsp. vulgaris ATCC 29579, Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough
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