STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75264.1Hemolysin; COG: Large exoproteins involved in heme utilization or adhesion. (674 aa)    
Predicted Functional Partners:
CBW75271.1
Hemagglutinin-like protein; COG: Large exoproteins involved in heme utilization or adhesion; Pfam: Haemagluttinin repeat::PF05594<br>haemagglutination activity domain::PF05860.
 
      0.706
CBW75262.1
Transposase; COG: Transposase and inactivated derivatives; Pfam: Integrase core domain::PF00665.
       0.457
CBW75263.1
Unnamed protein product.
       0.457
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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