STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW75586.14-oxalocrotonate decarboxylase (EC 4.1.1.77); COG: 2-keto-4-pentenoate hydratase; Pfam: Hydratase/decarboxylase::PF01689. (255 aa)    
Predicted Functional Partners:
CBW75587.1
2-oxopent-4-enoate hydratase (EC 4.2.1.80); COG: 2-keto-4-pentenoate hydratase; Pfam: Hydratase/decarboxylase::PF01689.
 
  
 
0.981
CBW75585.1
Acetaldehyde dehydrogenase (EC 1.2.1.10); Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.
  
 0.958
CBW75584.1
4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.39); Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.
 
  
 0.913
CBW73761.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase (EC 5.3.3.10); COG: 5-carboxymethyl-2-hydroxymuconate isomerase; Pfam: 5-carboxymethyl-2-hydroxymuconate isomerase::PF02962.
 
  
 0.694
CBW73760.1
3,4-dihydroxyphenylacetate 2,3-dioxygenase (EC 1.13.11.15); COG: Uncharacterized conserved protein; Pfam: Catalytic LigB subunit of aromatic ring-opening dioxygenase::PF02900.
 
  
 0.676
CBW75583.1
Adenosine deaminase (EC 3.5.4.4).
  
    0.597
CBW75589.1
Transcriptional regulators, LysR family; COG: Transcriptional regulator; Pfam: Bacterial regulatory helix-turn-helix protein, lysR family::PF00126<br>LysR substrate binding domain::PF03466.
       0.559
CBW75591.1
Unnamed protein product.
       0.444
CBW75590.1
F-box domain-containing protein; Unnamed protein product.
       0.444
leuA
2-isopropylmalate synthase (EC 2.3.3.13); Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.
  
  
 0.425
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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