STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBW76273.1Cytochrome c551; COG: Cytochrome c551/c552; Pfam: Cytochrome c::PF00034. (137 aa)    
Predicted Functional Partners:
CBW76274.1
21 kDa hemolysin precursor; COG: Predicted periplasmic or secreted lipoprotein; Pfam: Putative phospholipid-binding domain::PF04972.
 
     0.826
CBW76276.1
Endonuclease (EC 3.1.-.-); COG: Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Pfam: Uncharacterised protein family UPF0102::PF02021; Belongs to the UPF0102 family.
       0.737
CBW76275.1
Phosphoheptose isomerase (EC 5.3.1.-); COG: Phosphoheptose isomerase.
       0.737
CBW74498.1
ALCE; COG: Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit; Pfam: Rieske [2Fe-2S] domain::PF00355.
  
     0.564
rsmI
Tetrapyrrole (Corrin/Porphyrin) methylase family protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.
       0.547
CBW76169.1
Cytochrome c oxidase polypeptide II (EC 1.9.3.1); Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
  
  
 0.499
Your Current Organism:
Paraburkholderia rhizoxinica
NCBI taxonomy Id: 882378
Other names: Burkholderia rhizoxinica HKI 454, P. rhizoxinica HKI 454, Paraburkholderia rhizoxinica HKI 454
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.