STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LTFLactotransferrin. (703 aa)    
Predicted Functional Partners:
TFRC
Transferrin receptor.
  
 0.942
CYB5R4
Cytochrome b5 reductase 4.
    
 0.790
ENSAOWP00000019316
annotation not available
   
 0.684
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.668
WDR43
WD repeat domain 43.
   
 0.610
UTP20
UTP20 small subunit processome component.
   
  0.608
GLMN
Glomulin, FKBP associated protein.
   
  0.608
RPS6
Ribosomal protein S6.
   
  0.601
ENSAOWP00000015388
annotation not available
      
 0.599
RPS7
Ribosomal protein S7.
    
 0.595
Your Current Organism:
Apteryx owenii
NCBI taxonomy Id: 8824
Other names: A. owenii, little spotted kiwi
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.