STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKS41255.1DNA-3-methyladenine glycosylase I. (207 aa)    
Predicted Functional Partners:
EKS41254.1
Hypothetical protein.
       0.804
EKS41256.1
Folate-binding protein YgfZ.
       0.804
EKS41253.1
Hypothetical protein.
       0.620
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
  
 0.590
EKS41257.1
Dihydroorotase, multifunctional complex type.
       0.584
EKS41252.1
Hypothetical protein.
       0.439
EKS34357.1
methylated-DNA-[protein]-cysteine S-methyltransferase.
     
 0.406
Your Current Organism:
Afipia broomeae
NCBI taxonomy Id: 883078
Other names: A. broomeae ATCC 49717, Afipia broomeae ATCC 49717, Afipia broomeae B-91-007286, Afipia broomeae F186
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.