STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKB56657.1Hypothetical protein. (55 aa)    
Predicted Functional Partners:
EKB56654.1
Hypothetical protein.
       0.723
EKB56655.1
Hypothetical protein.
       0.723
EKB56656.1
Agmatinase; Belongs to the arginase family.
       0.723
EKB56658.1
Hypothetical protein.
       0.550
EKB56659.1
Hypothetical protein.
       0.514
EKB56660.1
TIGR02757 family protein.
       0.514
EKB56661.1
Hypothetical protein.
       0.478
Your Current Organism:
Bergeyella zoohelcum
NCBI taxonomy Id: 883096
Other names: B. zoohelcum ATCC 43767, Bergeyella zoohelcum ATCC 43767
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.