STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HACL12-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (571 aa)    
Predicted Functional Partners:
PEX5
Peroxisomal biogenesis factor 5.
 
  
 0.967
PEX5L
Peroxisomal biogenesis factor 5 like.
 
  
 0.960
ZMYND19
Zinc finger MYND-type containing 19.
    
   0.817
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 0.771
ENSAPLP00000020216
Uncharacterized protein.
    
 0.715
ACOX1
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.714
ACOX2
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.702
ACOX3
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.696
IDH3A
Isocitrate dehydrogenase [NAD] subunit, mitochondrial.
 
 0.694
AGXT
Serine--pyruvate aminotransferase.
  
 
 0.693
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.