STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (386 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.992
RAB41
RAB41, member RAS oncogene family.
    
 0.755
RAB6A
RAB6A, member RAS oncogene family.
    
 0.755
VPS53
VPS53 subunit of GARP complex.
     
 0.705
RAB36
RAB36, member RAS oncogene family.
    
 0.696
VPS54
VPS54 subunit of GARP complex.
     
 0.687
COG6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.672
STX16
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
    
 0.658
ARL1
ADP ribosylation factor like GTPase 1; Belongs to the small GTPase superfamily. Arf family.
    
  0.642
RAB33B
RAB33B, member RAS oncogene family.
    
 0.631
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.