STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPG21SPG21 abhydrolase domain containing, maspardin. (310 aa)    
Predicted Functional Partners:
PAAF1
Proteasomal ATPase associated factor 1.
      
 0.622
TECPR2
Tectonin beta-propeller repeat containing 2.
      
 0.609
SPG11
SPG11 vesicle trafficking associated, spatacsin.
      
 0.590
TM2D1
TM2 domain containing 1.
      
 0.586
SPART
Spartin.
      
 0.553
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.548
TNFSF15
TNF superfamily member 15.
      
 0.513
ENSAPLP00000021772
IG domain-containing protein.
      
 0.508
NIPA1
NIPA magnesium transporter 1.
      
 0.499
ENSAPLP00000028430
Ig-like domain-containing protein.
      
 0.497
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.