STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSAPLP00000023974Uncharacterized protein. (42 aa)    
Predicted Functional Partners:
CDC40
Cell division cycle 40.
   
 0.785
U3IYL3_ANAPP
Uncharacterized protein.
   
 0.774
CWC27
CWC27 spliceosome associated cyclophilin.
   
 0.767
SRRM1
Serine and arginine repetitive matrix 1.
    
 0.764
MFAP1
Microfibril associated protein 1.
   
  0.751
DHX38
DEAH-box helicase 38.
   
 0.741
SNW1
SNW domain containing 1.
    
 0.737
BUD31
BUD31 homolog.
    
 0.722
CWC25
CWC25 spliceosome associated protein homolog.
   
 0.700
SRRM3
Serine/arginine repetitive matrix 3.
    
 0.698
Your Current Organism:
Anas platyrhynchos
NCBI taxonomy Id: 8840
Other names: A. platyrhynchos platyrhynchos, Anas platyrhynchos platyrhynchos, common mallard, northern mallard
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