STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bglGCryptic beta-glucoside bgl operon antiterminator. (281 aa)    
Predicted Functional Partners:
glcB
EIICBA-Glc 2.
 
 
 0.987
bglF_1
EIIBCA-Bgl.
 
 
 0.957
bglF_3
EIIBCA-Bgl.
 
 0.877
bglF_2
EIIBCA-Bgl.
 
 
 0.866
fruA
EIIABC-Fru.
 
 
 0.831
licB
Lichenan-specific phosphotransferase enzyme IIB component.
 
  
 0.710
gmuA
Oligo-beta-mannoside-specific phosphotransferase enzyme IIA component.
 
  
 0.547
gmuC
PTS system oligo-beta-mannoside-specific EIIC component.
 
  
 0.498
araR
Arabinose metabolism transcriptional repressor.
  
  
 0.485
CUN71409.1
RDD family.
  
    0.450
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.