STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CUO06684.1Clostridial hydrophobic W. (809 aa)    
Predicted Functional Partners:
tee6
T6 antigen.
  
 
 0.939
cwlC
Sporulation-specific N-acetylmuramoyl-L-alanine amidase.
 
 0.839
lytB
Putative endo-beta-N-acetylglucosaminidase precursor.
 
    
0.759
CUN59691.1
Uncharacterised protein.
    
  0.692
gluP
Rhomboid protease gluP.
  
   0.667
sulD
Bifunctional folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
  0.656
CUN64740.1
Uncharacterised protein.
   
   0.635
acm
Lysozyme M1 precursor.
 
  
0.574
iap
Probable endopeptidase p60 precursor.
  
  
 0.524
CUN38667.1
Predicted outer membrane protein.
  
  
  0.497
Your Current Organism:
Dorea longicatena
NCBI taxonomy Id: 88431
Other names: CCUG 45247, D. longicatena, DSM 13814, Dorea longicatena Taras et al. 2002, Eubacterium sp. III-35, JCM 11232, strain 111-35
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.