STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2AUbiquitin-conjugating enzyme E2 A; Belongs to the ubiquitin-conjugating enzyme family. (224 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.998
RAD18
E3 ubiquitin-protein ligase RAD18.
    
 0.977
RPS27A
Ubiquitin-40S ribosomal protein S27a.
    
 0.943
Ubc
Polyubiquitin-B.
   
 0.941
RNF40
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
    
 0.914
RNF20
E3 ubiquitin protein ligase; Belongs to the BRE1 family.
    
 0.914
TRIP12
Putative E3 ubiquitin-protein ligase TRIP12.
    
 0.903
LEO1
RNA polymerase-associated protein LEO1.
    
 0.903
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.883
UBE2V2
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.876
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
Server load: medium (42%) [HD]