STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAPINSNARE-associated protein Snapin. (136 aa)    
Predicted Functional Partners:
DTNBP1
Dysbindin.
   
 0.983
DNAJC6
Putative tyrosine-protein phosphatase auxilin.
   
 
  0.976
GAK
Cyclin-G-associated kinase.
   
 
  0.976
BLOC1S2
Uncharacterized protein.
   
 0.975
Swi5
DNA repair protein SWI5 like protein.
   
 
 0.888
BLOC1S6
Pallidin.
    
 0.875
H920_04768
Biogenesis of lysosome-related organelles complex 1 subunit 5; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO).
   
 0.816
Borcs7
Uncharacterized protein.
   
 
 0.781
SNAP25
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
    
 
 0.769
SMAD4
Mothers against decapentaplegic homolog.
 
   
 0.747
Your Current Organism:
Fukomys damarensis
NCBI taxonomy Id: 885580
Other names: Coetomys damarensis, Cryptomys damarensis, Damara mole rat, Damara mole-rat, F. damarensis
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