STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEM69097.1Cyclomaltodextrin glucanotransferase; PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: fbc:FB2170_13703 periplasmic alpha-amylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Cyclomaltodextrin glucanotransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Periplasmic alpha-amylase. (560 aa)    
Predicted Functional Partners:
AEM69454.1
Kojibiose phosphorylase; PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196:IPR005195:IPR005194; KEGG: fbc:FB2170_08179 trehalose/maltose hydrolase (phosphorylase); PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: Trehalose/maltose hydrolase (Phosphorylase).
 
 
 0.955
AEM71436.1
Alpha-glucosidase; PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: fbc:FB2170_15338 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31; PRIAM: Alpha-glucosidase; SPTR: Alpha-glucosidase, family 31 of glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
 
 0.943
glgB
1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 
 0.941
AEM69997.1
PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: fbc:FB2170_08184 putative glycosidase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative glycosidase.
 
     0.578
AEM69096.1
KEGG: fbc:FB2170_13698 hypothetical protein; SPTR: Putative uncharacterized protein.
       0.533
AEM69998.1
PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: fbc:FB2170_08169 putative LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family.
 
  
 0.514
AEM69453.1
PFAM: Major Facilitator Superfamily; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: zpr:ZPR_2820 sugar (GPH):cation symporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar (GPH):cation symporter.
 
  
 0.502
AEM69162.1
PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: fbc:FB2170_13998 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB.
  
 
 0.490
AEM70972.1
Glycoside hydrolase family 13 domain protein; PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro IPR004193; KEGG: fbc:FB2170_17281 putative isoamylase protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Putative isoamylase protein.
 
  
 0.477
AEM69700.1
PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; COGs: COG0297 Glycogen synthase; InterPro IPR013534:IPR001296; KEGG: fbc:FB2170_02370 glycogen synthase; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase.
 
  
 0.457
Your Current Organism:
Muricauda ruestringensis
NCBI taxonomy Id: 886377
Other names: M. ruestringensis DSM 13258, Muricauda ruestringensis B1, Muricauda ruestringensis DSM 13258, Muricauda ruestringensis str. DSM 13258, Muricauda ruestringensis strain DSM 13258
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