STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV01242.1BMC domain protein; COG: COG4577. (179 aa)    
Predicted Functional Partners:
EFV01244.1
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; COG: COG4576.
 
 
 
 0.956
EFV01243.1
Respiratory-chain NADH dehydrogenase 51 Kd subunit; COG: COG4656.
 
    0.949
EFV01246.1
Putative ATP:cob(I)alamin adenosyltransferase; COG: COG4812.
 
  
 0.916
EFV00938.1
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; COG: COG4576.
 
 
 
 0.814
EFV01240.1
Ethanolamine utilization protein EutQ; COG: COG4766.
 
  
 0.801
EFV00941.1
4Fe-4S binding domain protein; COG: COG4656.
 
    0.786
EFV01245.1
Hypothetical protein.
       0.779
EFV01248.1
BMC domain protein; COG: COG4577.
 
   
 0.774
EFV01247.1
BMC domain protein; COG: COG4577.
 
   
 0.773
EFV01251.1
BMC domain protein; COG: COG4816.
 
  
 0.754
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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