STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EFV00580.1GDSL-like protein. (266 aa)    
Predicted Functional Partners:
EFV00944.1
Hypothetical protein.
  
 0.800
EFV01859.1
Hypothetical protein.
  
   0.721
EFV00578.1
ABC transporter, ATP-binding protein; COG: COG1131.
  
    0.657
EFV00577.1
Transcriptional regulator, AbrB family.
       0.651
EFV00579.1
ABC-2 type transporter.
       0.651
EFV00576.1
Hypothetical protein.
       0.603
EFV02088.1
Hypothetical protein.
   
  0.518
EFV00788.1
Conserved repeat protein.
   
  0.518
EFV01496.1
Hypothetical protein.
  
  
 0.508
EFV00573.1
Hypothetical protein.
       0.419
Your Current Organism:
Pseudoramibacter alactolyticus
NCBI taxonomy Id: 887929
Other names: P. alactolyticus ATCC 23263, Pseudoramibacter alactolyticus ATCC 23263, Pseudoramibacter alactolyticus str. ATCC 23263, Pseudoramibacter alactolyticus strain ATCC 23263
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.