STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERK48610.1KEGG: smf:Smon_1320 2.7e-96 hexulose-6-phosphate isomerase K03082; Psort location: Cytoplasmic, score: 8.96 (291 aa)    
Predicted Functional Partners:
ERK48609.1
KEGG: str:Sterm_0147 6.7e-100 L-ribulose-5-phosphate 4-epimerase; K01786 L-ribulose-5-phosphate 4-epimerase; Psort location: Cytoplasmic, score: 9.97
 
 0.995
ERK48611.1
Putative 3-dehydro-L-gulonate-6-phosphate decarboxylase; KEGG: san:gbs1853 1.7e-101 ulaD; 3-keto-L-gulonate-6-phosphate decarboxylase K03081; Psort location: Cytoplasmic, score: 8.96
 
 
 0.975
ERK48615.1
Uncharacterized protein; KEGG: smf:Smon_1324 1.6e-167 putative L-ascorbate-6-phosphate lactonase UlaG; K03476 L-ascorbate 6-phosphate lactonase; Psort location: Cytoplasmic, score: 9.97
 
   
 0.872
ERK48613.1
KEGG: str:Sterm_0143 3.2e-29 PTS system lactose/cellobiose-specific transporter subunit IIB; K02822 PTS system, ascorbate-specific IIB component
 
    0.859
ERK48614.1
Putative sugar-specific permease, SgaT/UlaA; KEGG: sgg:SGGBAA2069_c21250 5.8e-149 ulaA1; PTS system ascorbate-specific transporter subunit IIC K03475; Psort location: CytoplasmicMembrane, score: 10.00
 
   
 0.855
ERK48612.1
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; KEGG: str:Sterm_0144 8.2e-47 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN; K02821 PTS system, ascorbate-specific IIA component; Psort location: Cytoplasmic, score: 8.96
 
    0.723
ERK48608.1
DNA-binding helix-turn-helix protein; Psort location: Cytoplasmic, score: 8.96
       0.602
Your Current Organism:
Leptotrichia wadei
NCBI taxonomy Id: 888055
Other names: L. wadei F0279, Leptotrichia wadei, Leptotrichia wadei F0279, Leptotrichia wadei str. F0279, Leptotrichia wadei strain F0279
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