STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGC18373.1Tetratricopeptide repeat protein. (197 aa)    
Predicted Functional Partners:
hisS
histidine--tRNA ligase; COG: COG0124.
  
    0.951
EGC18374.1
Hypothetical protein.
       0.705
der
Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.
  
    0.607
EGC16315.1
Conserved hypothetical protein, PP_1857 family; COG: COG4394.
  
     0.605
EGC16424.1
Hypothetical protein; COG: COG3317.
  
    0.554
EGC17002.1
RNB-like protein; COG: COG0557.
  
     0.543
lptE
Rare lipoprotein B family protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane; Belongs to the LptE lipoprotein family.
  
    0.528
EGC16281.1
Hypothetical protein.
  
     0.528
EGC17114.1
Hypothetical protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.527
EGC16266.1
Hypothetical protein; COG: COG2911.
  
     0.504
Your Current Organism:
Kingella denitrificans
NCBI taxonomy Id: 888741
Other names: K. denitrificans ATCC 33394, Kingella denitrificans ATCC 33394, Kingella denitrificans str. ATCC 33394, Kingella denitrificans strain ATCC 33394
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.