STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR76673.1Type cbb3 cytochrome oxidase biogenesis protein CcoG, involved in Cu oxidation. (461 aa)    
Predicted Functional Partners:
APR76674.1
Cytochrome c oxidase subunit CcoP.
 
  
 0.990
APR76676.1
Cytochrome c oxidase subunit CcoN; Belongs to the heme-copper respiratory oxidase family.
 
  
 0.988
APR76672.1
Hypothetical protein.
 
   
 0.950
APR76678.1
Type cbb3 cytochrome oxidase biogenesis protein CcoI.
 
  
 0.922
APR87682.1
Ferredoxin.
  
 
 0.900
APR75845.1
Fe-S-cluster-containing hydrogenase components 1.
  
  
 0.734
APR76321.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit protein.
  
  
 0.734
APR79674.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
 0.734
APR74714.1
UDP-galactose-lipid carrier transferase.
   
    0.619
APR79238.1
UDP-galactose-lipid carrier transferase.
   
    0.619
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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