STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR84478.1Methionine ABC transporter ATP-binding protein. (808 aa)    
Predicted Functional Partners:
APR84210.1
3-isopropylmalate dehydratase large subunit protein.
  
  
 0.778
APR84477.1
Acetyltransferase.
       0.691
APR84479.1
Long-chain-fatty-acid--CoA ligase.
     
 0.481
APR84481.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.478
APR84480.1
Hypothetical protein.
       0.476
APR86174.1
Glutamate synthase [NADPH] large chain.
  
  
 0.443
APR86299.1
Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide.
  
 0.442
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.430
APR85509.1
Branched-chain amino acid aminotransferase.
  
 
 0.430
APR84482.1
Hypothetical protein.
     
 0.406
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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