STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APR88475.1Hypothetical protein. (312 aa)    
Predicted Functional Partners:
APR88474.1
NHL repeat domain protein.
 
    0.953
APR88472.1
Cell division protein FtsH.
 
     0.932
APR88477.1
Hypothetical protein.
 
 
 0.922
APR88481.1
Hypothetical protein.
 
 
 0.917
APR88480.1
VgrG protein.
 
 
   0.906
APR88483.1
Hypothetical protein.
 
 
 
 0.902
APR88488.1
Phage tail sheath protein FI.
 
 
 0.886
APR88473.1
Phage tail fiber protein.
 
     0.884
APR88487.1
Phage tail sheath protein FI.
 
 
 0.882
APR88479.1
VgrG protein.
 
     0.874
Your Current Organism:
Minicystis rosea
NCBI taxonomy Id: 888845
Other names: DSM 24000, M. rosea, Minicystis rosea Garcia et al. 2014, NCCB 100349, Sorangiineae bacterium SBNa008, strain SBNa008
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