STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG36573.1PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt). (671 aa)    
Predicted Functional Partners:
AFG36576.1
Hypothetical protein.
     
 0.789
AFG36575.1
PFAM: FecR protein.
     
 0.787
AFG36572.1
Conserved repeat protein; PFAM: Listeria-Bacteroides repeat domain (List_Bact_rpt); TIGRFAM: Listeria/Bacterioides repeat.
  
  
0.783
AFG36574.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; HAMP domain.
       0.781
AFG38019.1
Hypothetical protein.
  
 
 0.720
AFG36358.1
Putative esterase of the alpha-beta hydrolase superfamily; PFAM: Patatin-like phospholipase; Surface antigen.
  
 
 0.716
AFG37605.1
Beta-barrel assembly machine subunit BamA; PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein.
  
 
 0.703
AFG38291.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen.
  
 
 0.703
AFG37685.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: SurA N-terminal domain; PPIC-type PPIASE domain.
   
 
 0.611
AFG37917.1
Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain.
   
 
 0.566
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.