STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFG38588.1ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter. (215 aa)    
Predicted Functional Partners:
AFG38082.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
  
     0.773
AFG38589.1
ABC-type uncharacterized transport system, permease component; PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein.
       0.773
AFG36849.1
ATPase component of Mn/Zn ABC-type transporter; PFAM: ABC transporter.
  
     0.760
AFG36604.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
  
     0.751
AFG38435.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component.
  
     0.748
AFG37116.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
     0.718
AFG38345.1
ABC-type antimicrobial peptide transport system, ATPase component; PFAM: ABC transporter.
  
     0.660
AFG38327.1
ATPase component of various ABC-type transport systems with duplicated ATPase domain; PFAM: ABC transporter.
  
     0.606
AFG38284.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: ABC transporter.
  
     0.582
AFG38413.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
     0.576
Your Current Organism:
Spirochaeta africana
NCBI taxonomy Id: 889378
Other names: S. africana DSM 8902, Spirochaeta africana DSM 8902, Spirochaeta africana Z-7692, Spirochaeta africana str. DSM 8902, Spirochaeta africana strain DSM 8902
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.