STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP91692.1Hypothetical protein. (94 aa)    
Predicted Functional Partners:
SEP91664.1
N-acetylmuramoyl-L-alanine amidase.
       0.773
SEP91718.1
Hypothetical protein.
       0.773
SEP91748.1
Hypothetical protein.
       0.752
SEP91781.1
Hypothetical protein.
       0.752
SEP91809.1
Lysophospholipase L1.
       0.721
SEP91841.1
Hypothetical protein.
       0.721
SEP91864.1
Flagellum-specific peptidoglycan hydrolase FlgJ.
       0.721
SEP91896.1
NlpC/P60 family protein.
       0.692
SEP91930.1
Putative phage tail component, N-terminal domain-containing protein.
       0.692
SEP91959.1
Phage-related protein.
       0.692
Your Current Organism:
Ignavigranum ruoffiae
NCBI taxonomy Id: 89093
Other names: ATCC 700630, CCUG 37658, CIP 105896, DSM 15695, I. ruoffiae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.