STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00015332Bile acyl-CoA synthetase-like. (172 aa)    
Predicted Functional Partners:
BBS7
Bardet-Biedl syndrome 7.
   
 0.843
BBS4
Bardet-Biedl syndrome 4.
   
 0.809
TTC8
Tetratricopeptide repeat domain 8, transcript variant X1.
   
 0.808
A306_00015265
Very long-chain acyl-CoA synthetase-like.
 
     0.752
A306_00012633
Protein PTHB1-like.
   
 0.734
BBS9
Bardet-Biedl syndrome 9.
   
 0.734
KIFC3
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.720
KIF25
Kinesin family member 25; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.720
SCP2
Sterol carrier protein 2; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.670
A306_00000186
Uncharacterized protein.
   
 0.629
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.