STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CNN2Calponin; Thin filament-associated protein that is implicated in the regulation and modulation of smooth muscle contraction. It is capable of binding to actin, calmodulin, troponin C and tropomyosin. The interaction of calponin with actin inhibits the actomyosin Mg-ATPase activity. (254 aa)    
Predicted Functional Partners:
WDR90
WD repeat domain 90.
    
 
 0.805
ALG14
ALG14, UDP-N-acetylglucosaminyltransferase subunit.
 
    
 0.721
A306_00005715
Uncharacterized protein.
   
  
 0.660
CALML4
Calmodulin-like 4.
   
 0.652
FHOD1
Uncharacterized protein.
      
 0.642
CALB2
Calbindin 2.
   
 0.639
PLEK2
Pleckstrin 2.
     
 0.616
WDR1
WD repeat domain 1.
   
 
 0.580
EFHB
EF-hand domain family, member B.
   
   0.558
PLEC
Plectin.
      
 0.552
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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