STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00013575Selenium-binding protein 1-like. (553 aa)    
Predicted Functional Partners:
A306_00013574
Selenium-binding protein 1.
  
  
 
0.904
A306_00013576
Selenium-binding protein 1.
  
  
 
0.901
SQOR
Sulfide:quinone oxidoreductase, mitochondrial.
     
  0.900
MTR
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
 0.812
A306_00009703
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.811
A306_00009704
Cystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
     
 0.811
A306_00009853
Betaine--homocysteine S-methyltransferase 1.
   
 
  0.807
CCBL1
Cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1.
     
 0.803
CCBL2
Cysteine conjugate-beta lyase 2.
     
 0.803
A306_00004963
Sulfurtransferase.
   
 
  0.803
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.