STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NR1I3Nuclear receptor subfamily 1, group I, member 3. (404 aa)    
Predicted Functional Partners:
RXRA
Retinoid X receptor, alpha.
    
0.739
RXRG
Retinoid X receptor, gamma, transcript variant X1.
    
0.739
NCOA1
Nuclear receptor coactivator.
    
 0.695
NCOA3
Nuclear receptor coactivator.
    
 0.695
NCOA2
Nuclear receptor coactivator 2.
    
 0.695
NR1D2
Nuclear receptor subfamily 1, group D, member 2.
    
0.680
NCOR1
Nuclear receptor corepressor 1.
    
 0.633
NCOR2
Nuclear receptor corepressor 2.
    
 0.633
INPP5D
Inositol polyphosphate-5-phosphatase, 145kDa, transcript variant X1.
      
 0.628
MED1
Mediator complex subunit 1.
    
 0.604
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.