STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ID3Inhibitor of DNA binding 3, dominant negative helix-loop-helix protein. (97 aa)    
Predicted Functional Partners:
ID2
Inhibitor of DNA binding 2, dominant negative helix-loop-helix protein, transcript variant X1.
   
0.938
ESM1
Endothelial cell-specific molecule 1.
      
 0.543
MFSD8
Major facilitator superfamily domain containing 8.
      
 0.529
RPL8
Ribosomal protein L8.
      
 0.518
TCF3
Transcription factor 3, transcript variant X1.
    
 
 0.402
TCF4
Transcription factor 4.
    
 
 0.402
TCF12
Transcription factor 12, transcript variant X1.
    
 
 0.402
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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