STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MAK16Protein MAK16 homolog; Belongs to the MAK16 family. (332 aa)    
Predicted Functional Partners:
RPF1
Ribosome production factor 1 homolog.
   
 
 0.997
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.993
GTPBP4
GTP binding protein 4.
   
 
 0.993
EBNA1BP2
EBNA1 binding protein 2.
   
 
 0.990
RSL24D1
Ribosomal L24 domain containing 1.
   
   0.990
NOC3L
Nucleolar complex protein 3 homolog.
   
 
 0.987
RRP1B
Ribosomal RNA processing 1B.
   
 
 0.986
WDR12
WD repeat domain 12.
   
 
 0.984
GNL3
Guanine nucleotide binding protein-like 3 (Nucleolar).
   
 
 0.981
BRIX1
BRX1, biogenesis of ribosomes.
   
   0.979
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.