STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGXT2Alanine--glyoxylate aminotransferase 2; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (519 aa)    
Predicted Functional Partners:
AGXT
Serine--pyruvate aminotransferase.
  
 0.976
GLDC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
  
 
 0.953
PIPOX
Pipecolic acid oxidase.
  
 
 0.944
BCAT1
Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.943
ALDH7A1
Aldehyde dehydrogenase 7 family, member A1; Belongs to the aldehyde dehydrogenase family.
 
 0.940
A306_00008028
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.940
A306_00008029
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.940
ALDH2
Aldehyde dehydrogenase 2 family (Mitochondrial); Belongs to the aldehyde dehydrogenase family.
 
 0.940
ALDH9A1
Aldehyde dehydrogenase 9 family, member A1; Belongs to the aldehyde dehydrogenase family.
 
 0.940
GADL1
Glutamate decarboxylase-like 1.
 
 0.937
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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