STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRR1Leucine rich repeat protein 1. (378 aa)    
Predicted Functional Partners:
CUL2
Cullin 2, transcript variant X1; Belongs to the cullin family.
    
 0.973
TCEB1
Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C); Belongs to the SKP1 family.
    
 0.956
WDHD1
WD repeat and HMG-box DNA binding protein 1, transcript variant X1.
   
 
 0.801
DCN
Decorin; May affect the rate of fibrils formation.
  
   
 0.749
MCM3
DNA helicase; Belongs to the MCM family.
   
 
 0.739
PRELP
Proline/arginine-rich end leucine-rich repeat protein.
  
   
 0.735
GINS4
GINS complex subunit 4 (Sld5 homolog).
    
 
 0.731
GINS1
GINS complex subunit 1 (Psf1 homolog).
   
   0.697
TIMELESS
Timeless circadian clock.
    
 
 0.696
CLSPN
Claspin.
   
 
 0.696
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.