STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHCHD4Coiled-coil-helix-coiled-coil-helix domain containing 4. (98 aa)    
Predicted Functional Partners:
GFER
Sulfhydryl oxidase.
    
 0.976
A306_00003709
Cytochrome c oxidase copper chaperone.
   
 0.966
TIMM9
zf-Tim10_DDP domain-containing protein.
   
 0.889
A306_00013852
Uncharacterized protein.
   
 0.871
A306_00014331
Ig heavy chain Mem5.
   
 0.790
XRCC6BP1
Mitochondrial inner membrane protease ATP23; Belongs to the peptidase M76 family.
    
 
 0.729
A306_00000364
Uncharacterized protein.
   
 
 0.698
TIMM21
Uncharacterized protein.
    
 
 0.642
CHCHD2
Coiled-coil-helix-coiled-coil-helix domain containing 2.
    
 0.626
TIMM17A
Uncharacterized protein.
   
 
 0.597
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.