STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A306_00014212Inositol 1,4,5-trisphosphate receptor-interacting protein-like 1. (570 aa)    
Predicted Functional Partners:
FANCM
Fanconi anemia, complementation group M.
    
 0.641
POLD2
Polymerase (DNA directed), delta 2, accessory subunit.
    
 0.545
A306_00009883
Survival of motor neuron protein-like.
    
 0.527
SNRPE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.467
UBXN7
UBX domain-containing protein 7.
   
 
 0.466
SNRPD2
Small nuclear ribonucleoprotein Sm D2.
    
 0.445
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
  0.437
DDX20
DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.
   
 0.434
SNRPG
Small nuclear ribonucleoprotein G.
    
  0.413
A306_00000259
ERCC4 domain-containing protein.
    
 0.412
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.