STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM19RNA binding motif protein 19. (955 aa)    
Predicted Functional Partners:
BMS1
BMS1 ribosome biogenesis factor.
   
 
 0.991
PWP2
WD_REPEATS_REGION domain-containing protein.
   
 
 0.964
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.945
WDR12
WD repeat domain 12.
   
  
 0.931
DDX56
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
   
 
 0.921
FTSJ3
Uncharacterized protein.
   
   0.921
PDCD11
Programmed cell death 11.
   
   0.920
PES1
Pescadillo ribosomal biogenesis factor 1.
   
  
 0.910
DDX54
ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.
   
 
 0.909
GNL3
Guanine nucleotide binding protein-like 3 (Nucleolar).
   
 
 0.908
Your Current Organism:
Columba livia
NCBI taxonomy Id: 8932
Other names: C. livia, Columba domestica, Columba livia domestica, carrier pigeon, domestic pigeon, rock dove, rock pigeon
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.